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  5. Solyc04g009300.4.1

Solyc04g009300.4.1 (Solyc04g009300)


Aliases : Solyc04g009300

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 620.0)


Gene families : OG0005393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009300.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00268300 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 OrthoFinder output from all 47 species
Adi_g045219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G070100.1 Ceric.06G070100 not classified & original description: pacid=50620078... 0.03 OrthoFinder output from all 47 species
Ehy_g14660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033559001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.09 OrthoFinder output from all 47 species
Gb_19145 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 OrthoFinder output from all 47 species
LOC_Os06g30380.1 LOC_Os06g30380 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.06 OrthoFinder output from all 47 species
Mp7g03470.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 OrthoFinder output from all 47 species
Nbi_g19658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024057_P001 Zm00001e024057 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 404 478
No external refs found!