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Aliases : Solyc04g009050
Description : LNK circadian clock transcriptional co-activator
Gene families : OG0003774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003774_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g009050.4.1 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G64170 | No alias | dentin sialophosphoprotein-related | 0.13 | OrthoFinder output from all 47 species | |
| Aev_g05513 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g16387 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18072 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene04721.t1 | Aspi01Gene04721 | circadian clock transcriptional co-activator *(LNK) &... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043219 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g12901 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G049900.1 | Ceric.19G049900 | circadian clock transcriptional co-activator *(LNK) &... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02002 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g06165 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003080001 | No alias | Protein LNK1 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01003081001 | No alias | Multi-process regulation.circadian clock.evening element... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_36250 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g31360.2 | LOC_Os01g31360 | LNK circadian clock transcriptional co-activator | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os03g27019.1 | LOC_Os03g27019 | LNK circadian clock transcriptional co-activator | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g26965 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15350 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008429 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10483 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo440439 | No alias | Multi-process regulation.circadian clock.evening element... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29041 | No alias | circadian clock transcriptional co-activator *(LNK) &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001871_P006 | Zm00001e001871 | LNK circadian clock transcriptional co-activator | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e026345_P001 | Zm00001e026345 | LNK circadian clock transcriptional co-activator | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |