Solyc04g008470.3.1 (PDF2.3, LCR68, Solyc04g008470)


Aliases : PDF2.3, LCR68, Solyc04g008470

Description : defensin (PDF2)


Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008470.3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT2G02100 LCR69, PDF2.2 low-molecular-weight cysteine-rich 69 0.04 OrthoFinder output from all 47 species
AT2G02120 PDF2.1, LCR70 Scorpion toxin-like knottin superfamily protein 0.07 OrthoFinder output from all 47 species
AT2G31957 LCR75, LCR79 low-molecular-weight cysteine-rich 75 0.02 OrthoFinder output from all 47 species
AT5G63660 LCR74, PDF2.5 Scorpion toxin-like knottin superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01010274001 No alias Defensin-like protein OS=Petunia integrifolia 0.03 OrthoFinder output from all 47 species
GSVIVT01036750001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g70680.1 LOC_Os01g70680 defensin (PDF2) 0.03 OrthoFinder output from all 47 species
LOC_Os04g44130.1 LOC_Os04g44130 defensin (PDF2) 0.05 OrthoFinder output from all 47 species
MA_132614g0010 No alias defensin (PDF2) 0.02 OrthoFinder output from all 47 species
MA_1489g0010 PDF2.1, LCR70 defensin (PDF1). defensin (PDF2) 0.04 OrthoFinder output from all 47 species
MA_45256g0010 No alias defensin (PDF2) 0.04 OrthoFinder output from all 47 species
Solyc07g007735.1.1 LCR69, PDF2.2,... defensin (PDF2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!