LOC_Os10g41550 (Os10g0565200)

Aliases : Os10g0565200

Description : major CHO metabolism.degradation.starch.starch cleavage.beta amylase Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected). chloroplast beta-amylase (CT-BMY)

Gene families : OG_01_0000401 (Gene family) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g41550
Cluster HCCA cluster: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT3G23920 BAM1, BMY7, TR-BAMY beta-amylase 1 0.02 Gene family
MA_3193g0010 No alias major CHO metabolism.degradation.starch.starch... 0.01 Gene family
Smo232533 PACid_15420441 No description available 0.02 Gene family
Solyc01g067660.3.1 Solyc01g067660.3 major CHO metabolism.degradation.starch.starch... 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan
MF GO:0016161 beta-amylase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 85 499
No external refs found!