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  5. Solyc04g008110.3.1

Solyc04g008110.3.1 (ATCRE1, WOL, CRE1,...)


Aliases : ATCRE1, WOL, CRE1, AHK4, WOL1, Solyc04g008110

Description : receptor protein (AHK)


Gene families : OG0000777 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008110.3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT5G35750 AHK2, HK2 histidine kinase 2 0.05 OrthoFinder output from all 47 species
Als_g15631 ATCRE1, WOL,... receptor protein *(AHK) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19524 AHK2, HK2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19665 ATCRE1, WOL,... receptor protein *(AHK) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06328.t1 ATCRE1, WOL,... receptor protein *(AHK) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31643 AHK2, HK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G066900.1 ATCRE1, WOL,... receptor protein *(AHK) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.103 AHK2, HK2 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Dcu_g14526 ATCRE1, WOL,... receptor protein *(AHK) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010502001 HK3, AHK3 Phytohormones.cytokinin.perception and signal... 0.02 OrthoFinder output from all 47 species
Gb_05953 ATCRE1, WOL,... receptor protein (AHK) 0.03 OrthoFinder output from all 47 species
Gb_12720 ATCRE1, WOL,... receptor protein (AHK) 0.04 OrthoFinder output from all 47 species
LOC_Os01g69920.1 HK3, AHK3, LOC_Os01g69920 receptor protein (AHK) 0.03 OrthoFinder output from all 47 species
Len_g10398 ATCRE1, WOL,... receptor protein *(AHK) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36229 No alias receptor protein *(AHK) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR003594 HATPase_C 490 668
IPR001789 Sig_transdc_resp-reg_receiver 850 981
IPR006189 CHASE_dom 108 288
IPR003661 HisK_dim/P 378 443
No external refs found!