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  5. Solyc04g008050.4.1

Solyc04g008050.4.1 (ARR1, RR1, Solyc04g008050)


Aliases : ARR1, RR1, Solyc04g008050

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008050.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00045260 ARR1, RR1,... RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
Adi_g081824 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04858 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38660 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Aop_g05984 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23707.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Cba_g26825 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G078100.1 LUX, PCL1,... MYB-RELATED transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G049600.1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Dcu_g39028 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04944 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09286 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.05 OrthoFinder output from all 47 species
Lfl_g05541 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43149 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09446 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pnu_g20928 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02280 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11087 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0331.g027260 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Smo90720 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
Tin_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Zm00001e036325_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 213 261
IPR001789 Sig_transdc_resp-reg_receiver 28 136
No external refs found!