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  5. Solyc04g007960.4.1

Solyc04g007960.4.1 (Solyc04g007960)


Aliases : Solyc04g007960

Description : caleosin


Gene families : OG0001041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007960.4.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT1G23240 No alias Caleosin-related family protein 0.05 OrthoFinder output from all 47 species
AT1G23250 No alias Caleosin-related family protein 0.04 OrthoFinder output from all 47 species
AT1G70670 No alias Caleosin-related family protein 0.07 OrthoFinder output from all 47 species
AT1G70680 No alias Caleosin-related family protein 0.05 OrthoFinder output from all 47 species
AT2G33380 CLO-3, RD20 Caleosin-related family protein 0.05 OrthoFinder output from all 47 species
AT5G55240 ATPXG2 ARABIDOPSIS THALIANA PEROXYGENASE 2 0.03 OrthoFinder output from all 47 species
Ala_g11594 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31114 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g46293 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G095000.1 CLO-3, RD20,... Caleosin-type peroxygenase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16123 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20886 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_07562 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
Gb_10407 CLO-3, RD20 caleosin 0.02 OrthoFinder output from all 47 species
Gb_39631 CLO-3, RD20 caleosin 0.05 OrthoFinder output from all 47 species
Gb_39632 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
Gb_39637 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
LOC_Os04g43200.1 CLO-3, RD20,... caleosin 0.04 OrthoFinder output from all 47 species
LOC_Os06g14324.1 LOC_Os06g14324 caleosin 0.04 OrthoFinder output from all 47 species
LOC_Os06g14350.1 LOC_Os06g14350 caleosin 0.03 OrthoFinder output from all 47 species
LOC_Os06g14370.1 LOC_Os06g14370 caleosin 0.04 OrthoFinder output from all 47 species
MA_10428346g0010 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
MA_19224g0010 No alias caleosin 0.03 OrthoFinder output from all 47 species
Msp_g08244 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08322 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16427 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44656 No alias Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15116 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45030 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26657 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06119 ATPXG2 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005410.4.1 Solyc01g005410 caleosin 0.03 OrthoFinder output from all 47 species
Solyc04g005720.3.1 Solyc04g005720 caleosin 0.04 OrthoFinder output from all 47 species
Zm00001e000874_P001 CLO-3, RD20,... caleosin 0.06 OrthoFinder output from all 47 species
Zm00001e036026_P001 Zm00001e036026 caleosin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007736 Caleosin-related 17 183
No external refs found!