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  5. Solyc04g007560.3.1

Solyc04g007560.3.1 (Solyc04g007560)


Aliases : Solyc04g007560

Description : deubiquitinase recruiting protein (BRO1)


Gene families : OG0001827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007560.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT1G15130 No alias Endosomal targeting BRO1-like domain-containing protein 0.08 OrthoFinder output from all 47 species
Adi_g076950 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Adi_g116681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09598 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g02609 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56048.t1 Aspi01Gene56048 deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035704 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0305.g063901 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Cba_g05306 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.15 No alias Vacuolar-sorting protein BRO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre01.g004350 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g07127 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01011794001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.06 OrthoFinder output from all 47 species
Mp3g15580.1 No alias deubiquitinase recruiting protein (BRO1) 0.02 OrthoFinder output from all 47 species
Nbi_g03810 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g17456 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g28194 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g44924 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g44925 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g50680 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004485_P001 Zm00001e004485 deubiquitinase recruiting protein (BRO1) 0.05 OrthoFinder output from all 47 species
Zm00001e012624_P003 Zm00001e012624 deubiquitinase recruiting protein (BRO1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
InterPro domains Description Start Stop
IPR004328 BRO1_dom 15 395
IPR025304 ALIX_V_dom 431 716
No external refs found!