LOC_Os03g30570.1


Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG_01_0000721 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000721_tree ,
OG_02_0000424 (LandPlants) Phylogenetic Tree(s): OG_02_0000424_tree ,
OG_03_0000404 (SeedPlants) Phylogenetic Tree(s): OG_03_0000404_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g30570.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00036030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 Archaeplastida
AT1G69260 AFP1 ABI five binding protein 0.09 Archaeplastida
AT3G07255 No alias No description available 0.03 Archaeplastida
AT3G29575 AFP3 ABI five binding protein 3 0.12 Archaeplastida
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 Archaeplastida
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.08 Archaeplastida
Gb_29524 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
Pp3c2_19780V3.1 No alias novel interactor of JAZ 0.04 Archaeplastida
Smo402278 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 Archaeplastida
Smo446487 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 Archaeplastida
Solyc02g030630.2.1 No alias No annotation 0.04 Archaeplastida
Solyc02g066900.3.1 No alias No annotation 0.02 Archaeplastida
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.06 Archaeplastida
Solyc05g012210.4.1 No alias transcriptional co-repressor (AFP/NINJA) 0.03 Archaeplastida
Zm00001e002002_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.07 Archaeplastida
AMTR_s00056p00036030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 LandPlants
AT1G69260 AFP1 ABI five binding protein 0.08 LandPlants
AT3G07255 No alias No description available 0.03 LandPlants
AT3G29575 AFP3 ABI five binding protein 3 0.12 LandPlants
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 LandPlants
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.08 LandPlants
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.03 LandPlants
Pp3c2_19780V3.1 No alias novel interactor of JAZ 0.02 LandPlants
Smo402278 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.02 LandPlants
Smo446487 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 LandPlants
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.06 LandPlants
Solyc05g012210.4.1 No alias transcriptional co-repressor (AFP/NINJA) 0.03 LandPlants
Zm00001e002002_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.05 LandPlants
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.04 LandPlants
AT1G69260 AFP1 ABI five binding protein 0.09 SeedPlants
AT3G07255 No alias No description available 0.03 SeedPlants
AT3G29575 AFP3 ABI five binding protein 3 0.09 SeedPlants
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 SeedPlants
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.06 SeedPlants
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.03 SeedPlants
Solyc02g030620.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 SeedPlants
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.08 SeedPlants
Zm00001e002002_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.05 SeedPlants
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032308 Jas 236 298
IPR032310 NINJA_B 86 127
IPR012463 Ninja_motif 30 67
No external refs found!