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  5. Solyc04g006960.3.1

Solyc04g006960.3.1 (Solyc04g006960)


Aliases : Solyc04g006960

Description : cytokinin transporter (ABCG14). subfamily ABCG transporter


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g006960.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
AT1G31770 ABCG14 ATP-binding cassette 14 0.03 OrthoFinder output from all 47 species
Als_g16669 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06567 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07574 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12680 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13413 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47725 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02890 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036869001 ABCG14 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Len_g13042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57983 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_81274g0010 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03210 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013631 No alias subfamily ABCG transporter & original description: CDS=1-2199 0.02 OrthoFinder output from all 47 species
Solyc07g065770.3.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g013630.1.1 Solyc12g013630 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc12g013640.2.1 Solyc12g013640 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g06146 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26315 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 413 618
IPR003439 ABC_transporter-like_ATP-bd 104 254
No external refs found!