Solyc04g005670.3.1 (Solyc04g005670)

Aliases : Solyc04g005670

Description : F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana (sp|q8l736|ski11_arath : 529.0)

Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g005670.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00255050	evm_27.TU.AmTr_v1...	F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00175p00042660	evm_27.TU.AmTr_v1...	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT1G14330	No alias	Galactose oxidase/kelch repeat superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g021774	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Adi_g021775	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Adi_g056279	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g126567	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g04321	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Aop_g04345	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ceric.34G061900.1	Ceric.34G061900	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dcu_g08235	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Dde_g06004	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.05	OrthoFinder output from all 47 species
Ehy_g06805	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ehy_g15525	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
GSVIVT01020023001	No alias	F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana	0.09	OrthoFinder output from all 47 species
GSVIVT01025174001	No alias	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
LOC_Os03g07530.1	LOC_Os03g07530	F-box/kelch-repeat protein SKIP11 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Lfl_g22620	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Msp_g01177	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Nbi_g01288	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ore_g05366	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Pir_g09525	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ppi_g13481	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g09345	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g10982	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g22628	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g50031	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Smo33540	No alias	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Smo79476	No alias	F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Spa_g41282	No alias	substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Zm00001e000538_P001	Zm00001e000538	F-box/kelch-repeat protein At1g74510 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e012830_P001	Zm00001e012830	F-box/kelch-repeat protein SKIP11 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e023895_P005	Zm00001e023895	F-box/kelch-repeat protein At1g74510 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0004866	endopeptidase inhibitor activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0030414	peptidase inhibitor activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0061134	peptidase regulator activity	IEP	HCCA
MF	GO:0061135	endopeptidase regulator activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006652	Kelch_1	187	233
IPR006652	Kelch_1	235	284

External Links

No external refs found!

Solyc04g005670.3.1 (Solyc04g005670)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation