Aliases : Os10g0561800
Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. homeobox-leucine zipper protein 4 (HB4)
Gene families : OG_01_0000206 (Gene family) Phylogenetic Tree(s): OG0000206_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): LOC_Os10g41230 | |
Cluster | HCCA cluster: Cluster_201 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G22800 | HAT9 | Homeobox-leucine zipper protein family | 0.02 | Gene family | |
AT4G37790 | HAT22 | Homeobox-leucine zipper protein family | 0.03 | Gene family | |
LOC_Os09g27450 | Os09g0447000 | 33.99 development.unspecified Homeobox-leucine zipper... | 0.02 | Gene family | |
MA_12174g0010 | No alias | 33.99 development.unspecified Homeobox-leucine zipper... | 0.02 | Gene family | |
Solyc02g063520.3.1 | Solyc02g063520.3 | 33.99 development.unspecified Encodes homeobox protein... | 0.03 | Gene family | |
Solyc05g008050.2.1 | Solyc05g008050.2 | 27.3.22 RNA.regulation of transcription.HB,Homeobox... | 0.02 | Gene family | |
Solyc08g078300.3.1 | Solyc08g078300.3 | 27.3.22 RNA.regulation of transcription.HB,Homeobox... | 0.03 | Gene family | |
Zm00001d005875 | GRMZM2G366130 | 33.99 development.unspecified Homeobox-leucine zipper... | 0.05 | Gene family | |
Zm00001d014628 | GRMZM2G477415 | 27.3.22 RNA.regulation of transcription.HB,Homeobox... | 0.04 | Gene family | |
Zm00001d014630 | GRMZM2G307397 | 33.99 development.unspecified Encodes homeobox protein... | 0.05 | Gene family | |
Zm00001d020670 | GRMZM2G127537 | 33.99 development.unspecified Homeobox-leucine zipper... | 0.03 | Gene family | |
Zm00001d028304 | GRMZM2G126808 | 33.99 development.unspecified Homeobox-leucine zipper... | 0.02 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |