LOC_Os10g41230 (Os10g0561800)


Aliases : Os10g0561800

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome. homeobox-leucine zipper protein 4 (HB4)


Gene families : OG_01_0000206 (Gene family) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g41230
Cluster HCCA cluster: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT2G22800 HAT9 Homeobox-leucine zipper protein family 0.02 Gene family
AT4G37790 HAT22 Homeobox-leucine zipper protein family 0.03 Gene family
LOC_Os09g27450 Os09g0447000 33.99 development.unspecified Homeobox-leucine zipper... 0.02 Gene family
MA_12174g0010 No alias 33.99 development.unspecified Homeobox-leucine zipper... 0.02 Gene family
Solyc02g063520.3.1 Solyc02g063520.3 33.99 development.unspecified Encodes homeobox protein... 0.03 Gene family
Solyc05g008050.2.1 Solyc05g008050.2 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc08g078300.3.1 Solyc08g078300.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d005875 GRMZM2G366130 33.99 development.unspecified Homeobox-leucine zipper... 0.05 Gene family
Zm00001d014628 GRMZM2G477415 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d014630 GRMZM2G307397 33.99 development.unspecified Encodes homeobox protein... 0.05 Gene family
Zm00001d020670 GRMZM2G127537 33.99 development.unspecified Homeobox-leucine zipper... 0.03 Gene family
Zm00001d028304 GRMZM2G126808 33.99 development.unspecified Homeobox-leucine zipper... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 156 210
IPR006712 HD-ZIP_N 19 135
IPR003106 Leu_zip_homeo 212 246
No external refs found!