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  5. Solyc03g123990.3.1

Solyc03g123990.3.1 (Solyc03g123990)


Aliases : Solyc03g123990

Description : solute transporter (MTCC)


Gene families : OG0002083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g123990.3.1
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
Adi_g012800 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03030 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15650 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23239 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03056 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015772 ATBT1, EMB42,... solute transporter *(MTCC) & original description: CDS=153-1277 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026479 ATBT1, EMB42,... solute transporter *(MTCC) & original description: CDS=153-1277 0.03 OrthoFinder output from all 47 species
Smo173502 ATBT1, EMB42,... Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 184 264
IPR018108 Mitochondrial_sb/sol_carrier 71 152
IPR018108 Mitochondrial_sb/sol_carrier 275 361
No external refs found!