Solyc03g123820.2.1 (Solyc03g123820)

Aliases : Solyc03g123820

Description : (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana (sp|q9ssm2|mdll_arath : 778.0)

Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g123820.2.1
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
AT1G73050	No alias	Glucose-methanol-choline (GMC) oxidoreductase family protein	0.04	OrthoFinder output from all 47 species
Adi_g055034	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013124001	No alias	(R)-mandelonitrile lyase-like OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Len_g59481	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g41402	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g52283	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002156_P001	Zm00001e002156	Protein HOTHEAD OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007867	GMC_OxRtase_C	387	528
IPR000172	GMC_OxRdtase_N	42	319

External Links

No external refs found!