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  5. Solyc03g123580.4.1

Solyc03g123580.4.1 (Solyc03g123580)


Aliases : Solyc03g123580

Description : no hits & (original description: none)


Gene families : OG0001782 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g123580.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00089860 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g38842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53609.t1 Aspi01Gene53609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016673001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g54180.1 LOC_Os02g54180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g25150.1 LOC_Os10g25150 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g28887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024791_P001 Zm00001e024791 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e030753_P001 Zm00001e030753 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!