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  5. Solyc03g123500.4.1

Solyc03g123500.4.1 (RAP2.12, Solyc03g123500)


Aliases : RAP2.12, Solyc03g123500

Description : transcription factor (ERF)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g123500.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Adi_g082375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10334 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene41136.t1 CRF3, Aspi01Gene41136 subgroup ERF-VI transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0016.g014331 ATERF13, ERF13, EREBP not classified & original description: CDS=134-1000 0.01 OrthoFinder output from all 47 species
Azfi_s0070.g036708 No alias not classified & original description: CDS=1-939 0.04 OrthoFinder output from all 47 species
Cba_g69291 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.01 OrthoFinder output from all 47 species
Dde_g01348 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01017542001 No alias Ethylene-responsive transcription factor ERF084... 0.03 OrthoFinder output from all 47 species
Pir_g18632 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009580 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g13024 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g13578 ERF110 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Spa_g21493 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 115 162
No external refs found!