Solyc03g122070.3.1 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19, Solyc03g122070

Description : subfamily ABCB transporter

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g122070.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00193700	ABCB14,...	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
AMTR_s00018p00193820	PGP1, ABCB1,...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
AMTR_s00045p00108620	PGP11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00109790	PGP11,...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT1G02530	PGP12	P-glycoprotein 12	0.01	OrthoFinder output from all 47 species
AT3G28360	PGP16	P-glycoprotein 16	0.03	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.03	OrthoFinder output from all 47 species
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.02	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.02	OrthoFinder output from all 47 species
Ala_g15212	PGP13	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g17861	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g18028	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g27372	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g29011	PGP10	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g28419	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g12898	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g16050	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g33802	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g36046	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05873.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene08453.t1	PGP11, Aspi01Gene08453	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene35821.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene42791.t1	PGP21, Aspi01Gene42791	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene45620.t1	PGP11, Aspi01Gene45620	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0039.g026389	PGP11	subfamily ABCB transporter & original description: CDS=323-4378	0.01	OrthoFinder output from all 47 species
Cba_g75977	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.34G053700.1	PGP2, Ceric.34G053700	subfamily ABCB transporter & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.38G058800.1	PGP2, Ceric.38G058800	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g06724	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g14063	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g23401	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g35671	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g41330	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g45466	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28161	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g44934	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02960	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12010	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g13730	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_01718	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_08707	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_13908	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
LOC_Os02g09720.1	LOC_Os02g09720	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g54677	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08040	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g19646	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g33330	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10134765g0010	PGP11	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_10436810g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_126766g0010	PGP2	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_1824g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_9415070g0020	No alias	subfamily ABCB transporter	0.14	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Msp_g31505	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g32270	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g36979	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g19754	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g24809	PGP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g41769	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29607	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g04029	PGP11	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g42899	No alias	subfamily ABCB transporter & original description: none	0.09	OrthoFinder output from all 47 species
Pir_g49419	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g56055	PGP21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g60074	PGP11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g25857	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g30303	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03992	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g60298	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006646	PGP20	subfamily ABCB transporter & original description: CDS=24-3872	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919	ABCB19,...	subfamily ABCB transporter & original description: CDS=118-4143	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899	PGP11	subfamily ABCB transporter & original description: CDS=362-4450	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905	PGP11	not classified & original description: CDS=139-861	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018197	ABCB19,...	subfamily ABCB transporter & original description: CDS=226-4089	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019194	No alias	not classified & original description: CDS=54-1700	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022750	PGP11	subfamily ABCB transporter & original description: CDS=1-3756	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022862	No alias	not classified & original description: CDS=281-511	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0478.g027423	PGP11	subfamily ABCB transporter & original description: CDS=139-3981	0.03	OrthoFinder output from all 47 species
Sam_g03721	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g04479	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo236972	ABCB19,...	ABC transporter B family member 19 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc12g098840.3.1	PGP11, Solyc12g098840	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Spa_g00479	PGP20	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g06203	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g18839	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g11244	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g31718	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g41085	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e023274_P001	PGP2, Zm00001e023274	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	97	368
IPR003439	ABC_transporter-like_ATP-bd	438	586

External Links

No external refs found!

Solyc03g122070.3.1 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation