AMTR_s00067p00113950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00067.91

Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component


Gene families : OG_01_0007047 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007047_tree ,
OG_02_0007869 (LandPlants) Phylogenetic Tree(s): OG_02_0007869_tree ,
OG_03_0009641 (SeedPlants) Phylogenetic Tree(s): OG_03_0009641_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00067p00113950
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g43420.1 No alias TAC5 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
Smo404832 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 Archaeplastida
Solyc09g091830.4.1 No alias TAC5 cofactor of plastid-encoded RNA polymerase 0.05 Archaeplastida
AT4G13670 PTAC5 plastid transcriptionally active 5 0.02 LandPlants
GSVIVT01029077001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 LandPlants
LOC_Os04g43420.1 No alias TAC5 cofactor of plastid-encoded RNA polymerase 0.02 LandPlants
Smo404832 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 LandPlants
Solyc09g091830.4.1 No alias TAC5 cofactor of plastid-encoded RNA polymerase 0.04 LandPlants
AT4G13670 PTAC5 plastid transcriptionally active 5 0.02 SeedPlants
GSVIVT01029077001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 SeedPlants
LOC_Os04g43420.1 No alias TAC5 cofactor of plastid-encoded RNA polymerase 0.02 SeedPlants
Solyc09g091830.4.1 No alias TAC5 cofactor of plastid-encoded RNA polymerase 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 200 258
No external refs found!