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  5. Solyc03g121760.3.1

Solyc03g121760.3.1 (iqd8, Solyc03g121760)


Aliases : iqd8, Solyc03g121760

Description : no hits & (original description: none)


Gene families : OG0001294 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121760.3.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00027450 IQD6,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT1G72670 iqd8 IQ-domain 8 0.11 OrthoFinder output from all 47 species
Adi_g078505 IQD5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11971 IQD6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g18384 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00647 IQD6 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene15912.t1 IQD6, Aspi01Gene15912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023688 IQD6 not classified & original description: CDS=350-1708 0.04 OrthoFinder output from all 47 species
Cba_g38649 IQD6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G101400.1 IQD6, Ceric.09G101400 not classified & original description: pacid=50587571... 0.1 OrthoFinder output from all 47 species
Dac_g00730 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014238001 IQD10 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035382001 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.17 OrthoFinder output from all 47 species
Gb_01817 IQD6 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g09790.1 IQD6, LOC_Os01g09790 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os01g51230.1 IQD6, LOC_Os01g51230 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os06g06160.2 iqd9, LOC_Os06g06160 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g04277 IQD6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g11509 IQD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32341 IQD6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g24119 IQD6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02071 IQD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14460 IQD6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g014130.2.1 IQD10, Solyc12g014130 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g05096 IQD6 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e016563_P001 IQD6, Zm00001e016563 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e020006_P001 IQD6, Zm00001e020006 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032277_P001 IQD6, Zm00001e032277 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 94 113
IPR000048 IQ_motif_EF-hand-BS 116 133
No external refs found!