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Aliases : Solyc03g121710
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 184.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00049p00200350 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00083440 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008733 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013860 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022493 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102181 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116756 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14284 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08530 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12261 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16236 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08667 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g10341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12817 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008091 | No alias | not classified & original description: CDS=1-1311 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010823 | No alias | not classified & original description: CDS=686-1789 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013740 | No alias | not classified & original description: CDS=1-1461 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02546 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g09256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g76606 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G063200.1 | Ceric.14G063200 | not classified & original description: pacid=50633319... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G061100.1 | Ceric.19G061100 | not classified & original description: pacid=50575703... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.35G060600.1 | Ceric.35G060600 | not classified & original description: pacid=50581737... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.38G017100.1 | Ceric.38G017100 | not classified & original description: pacid=50580043... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001130.27 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g33428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g31601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g33739 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46989 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03669 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04644 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g16051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16933 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014729001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_33485 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35079 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g12850.1 | LOC_Os02g12850 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g33230.1 | LOC_Os10g33230 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08463 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g45356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432683g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_141102g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_473g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_79622g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g27850.1 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g22774 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g00898 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19973 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g02420 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c4_17440V3.1 | Pp3c4_17440 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05151 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0054.g014264 | No alias | not classified & original description: CDS=1-1203 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15340 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25944 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40264 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo101375 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04604 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07882 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11285 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21333 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g21639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07867 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002844_P001 | Zm00001e002844 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014461_P003 | Zm00001e014461 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e024336_P003 | Zm00001e024336 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e024934_P002 | Zm00001e024934 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e030652_P001 | Zm00001e030652 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037155_P004 | Zm00001e037155 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| MF | GO:0031491 | nucleosome binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |