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  5. Solyc03g120650.4.1

Solyc03g120650.4.1 (ROPGEF12, MEE64,...)


Aliases : ROPGEF12, MEE64, ATROPGEF12, Solyc03g120650

Description : PRONE-type RopGEF guanine nucleotide exchange factor


Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g120650.4.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00064220 ROPGEF8,... Multi-process regulation.Rop GTPase regulatory... 0.13 OrthoFinder output from all 47 species
AT1G52240 ATROPGEF11,... RHO guanyl-nucleotide exchange factor 11 0.11 OrthoFinder output from all 47 species
AT1G79860 ROPGEF12, MEE64,... RHO guanyl-nucleotide exchange factor 12 0.1 OrthoFinder output from all 47 species
AT2G45890 ATROPGEF4, RHS11, ROPGEF4 RHO guanyl-nucleotide exchange factor 4 0.06 OrthoFinder output from all 47 species
AT3G16130 PIRF2, ROPGEF13,... RHO guanyl-nucleotide exchange factor 13 0.06 OrthoFinder output from all 47 species
AT3G24620 ROPGEF8, ATROPGEF8 RHO guanyl-nucleotide exchange factor 8 0.12 OrthoFinder output from all 47 species
AT4G13240 ATROPGEF9, ROPGEF9 RHO guanyl-nucleotide exchange factor 9 0.13 OrthoFinder output from all 47 species
AT5G19560 ATROPGEF10, ROPGEF10 ROP uanine nucleotide exchange factor 10 0.02 OrthoFinder output from all 47 species
Adi_g011896 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Als_g23835 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Als_g52608 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Aop_g08558 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Aop_g09279 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Aop_g70258 ROPGEF8, ATROPGEF8 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72310.t1 ROPGEF7,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0358.g066818 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0580.g078306 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Cba_g06514 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z028300.1 ROPGEF7,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Dac_g07468 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Ehy_g18445 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01015369001 ROPGEF8, ATROPGEF8 Multi-process regulation.Rop GTPase regulatory... 0.15 OrthoFinder output from all 47 species
GSVIVT01017070001 ROPGEF12, MEE64,... Multi-process regulation.Rop GTPase regulatory... 0.1 OrthoFinder output from all 47 species
GSVIVT01036908001 ROPGEF14, ATROPGEF14 Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
Gb_14425 ROPGEF7, ATROPGEF7 PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
LOC_Os01g48410.1 ATROPGEF9,... PRONE-type RopGEF guanine nucleotide exchange factor 0.13 OrthoFinder output from all 47 species
LOC_Os01g55520.1 ATROPGEF11,... PRONE-type RopGEF guanine nucleotide exchange factor 0.11 OrthoFinder output from all 47 species
LOC_Os02g17240.1 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.1 OrthoFinder output from all 47 species
LOC_Os05g48640.1 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.11 OrthoFinder output from all 47 species
Nbi_g15696 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Ppi_g03194 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Ppi_g13319 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Solyc07g032730.4.1 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Solyc12g007150.3.1 ATROPGEF9,... PRONE-type RopGEF guanine nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Zm00001e007278_P001 ROPGEF3,... PRONE-type RopGEF guanine nucleotide exchange factor 0.01 OrthoFinder output from all 47 species
Zm00001e014205_P002 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.11 OrthoFinder output from all 47 species
Zm00001e015569_P002 ROPGEF14,... PRONE-type RopGEF guanine nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Zm00001e019750_P001 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.07 OrthoFinder output from all 47 species
Zm00001e020182_P002 ATROPGEF9,... PRONE-type RopGEF guanine nucleotide exchange factor 0.1 OrthoFinder output from all 47 species
Zm00001e024760_P001 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.12 OrthoFinder output from all 47 species
Zm00001e026517_P004 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005512 PRONE_dom 54 399
No external refs found!