Solyc03g119940.3.1 (Solyc03g119940)


Aliases : Solyc03g119940

Description : no hits & (original description: none)


Gene families : OG0003377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003377_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119940.3.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00134120 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AT3G15550 No alias unknown protein; Has 25732 Blast hits to 16979 proteins... 0.17 OrthoFinder output from all 47 species
Als_g14080 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13624 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene03202.t1 Aspi01Gene03202 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06857.t1 Aspi01Gene06857 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene59164.t1 Aspi01Gene59164 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013721 No alias not classified & original description: CDS=227-4048 0.05 OrthoFinder output from all 47 species
Azfi_s0037.g025986 No alias not classified & original description: CDS=415-3663 0.04 OrthoFinder output from all 47 species
Ceric.06G074700.1 Ceric.06G074700 not classified & original description: pacid=50619167... 0.14 OrthoFinder output from all 47 species
Ceric.14G001300.1 Ceric.14G001300 not classified & original description: pacid=50634026... 0.02 OrthoFinder output from all 47 species
Ceric.16G004100.1 Ceric.16G004100 not classified & original description: pacid=50589866... 0.04 OrthoFinder output from all 47 species
Dcu_g49521 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01017208001 No alias No description available 0.16 OrthoFinder output from all 47 species
Gb_34647 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os01g08150.1 LOC_Os01g08150 no hits & (original description: none) 0.27 OrthoFinder output from all 47 species
MA_170251g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_52914g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g26245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02479 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g07606 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g63404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0174.g024522 No alias not classified & original description: CDS=1-3315 0.04 OrthoFinder output from all 47 species
Smo98470 No alias No description available 0.1 OrthoFinder output from all 47 species
Spa_g46294 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g31268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016725_P002 Zm00001e016725 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!