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  5. Solyc03g118770.4.1

Solyc03g118770.4.1 (WOX1, Solyc03g118770)


Aliases : WOX1, Solyc03g118770

Description : transcription factor (WOX)


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g118770.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00189010 STIP, HB-3,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00020930 WOX4,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.04 OrthoFinder output from all 47 species
Ala_g32864 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49578.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63553.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32131 STPL, WOX8 WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008424001 WOX1 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
GSVIVT01011738001 WOX1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016360001 WOX5 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01018787001 WUS, PGA6, WUS1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01021144001 STIP, HB-3, WOX9 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01025075001 WOX3, PRS1, PRS RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_01484 WOX3, PRS1, PRS transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Gb_12294 No alias transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Gb_27283 WOX3, PRS1, PRS transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Gb_29958 WOX1 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os04g55590.1 WOX4, LOC_Os04g55590 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02730.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48990.1 STIP, HB-3,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
LOC_Os11g01130.2 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_10234279g0010 STPL, WOX8 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_10344604g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_747816g0010 STPL, WOX8 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e028776_P002 WOX2, Zm00001e028776 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 76 135
No external refs found!