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  5. Solyc03g118480.4.1

Solyc03g118480.4.1 (Solyc03g118480)


Aliases : Solyc03g118480

Description : no hits & (original description: none)


Gene families : OG0008913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g118480.4.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00092070 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
Ala_g25315 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g31930 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17655 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene72468.t1 Aspi01Gene72468 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G065500.1 Ceric.05G065500 not classified & original description: pacid=50577316... 0.14 OrthoFinder output from all 47 species
Cre09.g387578 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre09.g387615 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g14934 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01008470001 No alias No description available 0.12 OrthoFinder output from all 47 species
LOC_Os03g50420.1 LOC_Os03g50420 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Len_g07242 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g40674 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05191 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e005444_P001 Zm00001e005444 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 137 259
No external refs found!