1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g117730.3.1

Solyc03g117730.3.1 (AtTLP8, TLP8, Solyc03g117730)


Aliases : AtTLP8, TLP8, Solyc03g117730

Description : transcription factor (TUB)


Gene families : OG0004261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004261_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117730.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G16070 AtTLP8, TLP8 tubby like protein 8 0.12 OrthoFinder output from all 47 species
Als_g03648 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene12687.t1 AtTLP8, TLP8,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46266.t1 AtTLP8, TLP8,... TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G003600.1 AtTLP8, TLP8,... TUB-type transcription factor & original description:... 0.09 OrthoFinder output from all 47 species
Dac_g04627 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016095001 AtTLP8, TLP8 RNA biosynthesis.transcriptional activation.TUB... 0.13 OrthoFinder output from all 47 species
Gb_10186 AtTLP8, TLP8 transcription factor (TUB) 0.06 OrthoFinder output from all 47 species
LOC_Os02g08310.1 AtTLP8, TLP8,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Len_g01846 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_13250g0010 AtTLP8, TLP8 transcription factor (TUB) 0.07 OrthoFinder output from all 47 species
Msp_g14577 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02347 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023802 AtTLP8, TLP8 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g03337 No alias TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10640 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31402 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013819_P001 AtTLP8, TLP8,... transcription factor (TUB) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 160 400
No external refs found!