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  5. Solyc03g117080.4.1

Solyc03g117080.4.1 (Solyc03g117080)


Aliases : Solyc03g117080

Description : no hits & (original description: none)


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117080.4.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00104470 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.05 OrthoFinder output from all 47 species
AMTR_s00012p00263410 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
AT1G80720 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.07 OrthoFinder output from all 47 species
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.07 OrthoFinder output from all 47 species
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.1 OrthoFinder output from all 47 species
Adi_g013591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0174.g055935 No alias not classified & original description: CDS=174-1004 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056596 No alias not classified & original description: CDS=77-799 0.03 OrthoFinder output from all 47 species
Azfi_s0197.g057340 No alias not classified & original description: CDS=175-993 0.04 OrthoFinder output from all 47 species
Cba_g25289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G126700.1 Ceric.01G126700 not classified & original description: pacid=50591892... 0.03 OrthoFinder output from all 47 species
Ceric.06G023100.1 Ceric.06G023100 not classified & original description: pacid=50619513... 0.03 OrthoFinder output from all 47 species
Ceric.10G002400.1 Ceric.10G002400 not classified & original description: pacid=50611676... 0.04 OrthoFinder output from all 47 species
Cre04.g225600 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g09456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.13 OrthoFinder output from all 47 species
GSVIVT01017565001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_30186 No alias Uncharacterized protein At2g39795, mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os01g05010.1 LOC_Os01g05010 Uncharacterized protein At2g39795, mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.08 OrthoFinder output from all 47 species
LOC_Os08g34130.1 LOC_Os08g34130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g04606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.05 OrthoFinder output from all 47 species
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Msp_g36013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011209 No alias not classified & original description: CDS=95-946 0.03 OrthoFinder output from all 47 species
Sam_g08662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06431 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016932_P001 Zm00001e016932 Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Zm00001e036951_P001 Zm00001e036951 Uncharacterized protein At2g39795, mitochondrial... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 53 227
No external refs found!