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  5. Solyc03g116440.3.1

Solyc03g116440.3.1 (Solyc03g116440)


Aliases : Solyc03g116440

Description : MMD1/DUET meiotic recombination regulating protein. PHD finger transcription factor


Gene families : OG0003400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g116440.3.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G66170 MMD1 RING/FYVE/PHD zinc finger superfamily protein 0.01 OrthoFinder output from all 47 species
Cre03.g148250 MMD1 RNA biosynthesis.transcriptional activation.PHD finger... 0.01 OrthoFinder output from all 47 species
Sam_g48354 No alias PHD finger transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 660 708
No external refs found!