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  5. Solyc03g116360.2.1

Solyc03g116360.2.1 (Solyc03g116360)


Aliases : Solyc03g116360

Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 562.0)


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g116360.2.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00073920 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Ala_g39387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04436.t1 Aspi01Gene04436 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54964.t1 Aspi01Gene54964 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65113.t1 Aspi01Gene65113 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G007900.1 Ceric.33G007900 not classified & original description: pacid=50607060... 0.03 OrthoFinder output from all 47 species
Dac_g09907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
MA_136157g0010 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017246 No alias not classified & original description: CDS=1-3951 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021453 No alias not classified & original description: CDS=1695-2003 0.04 OrthoFinder output from all 47 species
Sam_g30101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo112120 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Tin_g08448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 319 366
IPR000408 Reg_chr_condens 595 642
IPR000408 Reg_chr_condens 371 422
IPR000408 Reg_chr_condens 426 474
IPR000408 Reg_chr_condens 492 538
IPR000408 Reg_chr_condens 542 588
IPR000306 Znf_FYVE 653 712
No external refs found!