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  5. Solyc03g116040.2.1

Solyc03g116040.2.1 (Solyc03g116040)


Aliases : Solyc03g116040

Description : Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana (sp|q6dbg8|arad1_arath : 261.0)


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g116040.2.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00189850 ARAD1,... Cell wall.pectin.rhamnogalacturonan... 0.02 OrthoFinder output from all 47 species
Adi_g054781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28946.t1 ARAD1, Aspi01Gene28946 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0071.g036860 No alias not classified & original description: CDS=400-2031 0.03 OrthoFinder output from all 47 species
Cba_g14163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G005700.1 ARAD1, Ceric.35G005700 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species
Mp3g05600.1 No alias Probable arabinosyltransferase ARAD2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ppi_g11467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19185 EDA5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32379 EDA5 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 111 425
No external refs found!