Solyc03g115660.3.1 (IBS1, Solyc03g115660)

Aliases : IBS1, Solyc03g115660

Description : protein kinase (CDK9)

Gene families : OG0000343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g115660.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00026630	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CMGC kinase...	0.03	OrthoFinder output from all 47 species
AT1G18670	IBS1	Protein kinase superfamily protein	0.05	OrthoFinder output from all 47 species
AT3G01085	No alias	Protein kinase superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G05050	No alias	Protein kinase superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g013453	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aev_g07915	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ala_g15168	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ala_g32305	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Als_g06463	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g15052	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g49575	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Aob_g23603	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aop_g02904	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aop_g12581	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aop_g19983	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aspi01Gene11123.t1	Aspi01Gene11123	EC_2.7 transferase transferring phosphorus-containing...	0.01	OrthoFinder output from all 47 species
Aspi01Gene17687.t1	Aspi01Gene17687	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Azfi_s0047.g030369	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Azfi_s0100.g044281	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Azfi_s1026.g095464	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g14082	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.08G060900.1	Ceric.08G060900	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.12G027500.1	Ceric.12G027500	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.27G063100.1	Ceric.27G063100	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ceric.37G054700.1	Ceric.37G054700	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g02350	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g23806	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dcu_g04929	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dcu_g17100	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g13782	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
GSVIVT01007956001	IBS1	Protein modification.phosphorylation.CMGC kinase...	0.01	OrthoFinder output from all 47 species
GSVIVT01021492001	No alias	Probable serine/threonine-protein kinase At1g09600...	0.03	OrthoFinder output from all 47 species
GSVIVT01034576001	No alias	Protein modification.phosphorylation.CMGC kinase...	0.03	OrthoFinder output from all 47 species
LOC_Os01g10430.1	LOC_Os01g10430	protein kinase (CDK9)	0.03	OrthoFinder output from all 47 species
LOC_Os02g20140.1	LOC_Os02g20140	Enzyme classification.EC_2 transferases.EC_2.7...	0.02	OrthoFinder output from all 47 species
Len_g03344	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Len_g36772	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Lfl_g04049	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
MA_10436318g0010	No alias	protein kinase (CDK9)	0.06	OrthoFinder output from all 47 species
MA_9043g0040	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Msp_g02482	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Msp_g33083	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g03126	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g22127	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ore_g22942	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pir_g17714	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013534	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017523	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Sam_g10441	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Sam_g12387	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g19750	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Sam_g30154	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sam_g35407	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Solyc04g051460.4.1	Solyc04g051460	protein kinase (CDK9)	0.05	OrthoFinder output from all 47 species
Solyc11g045610.2.1	Solyc11g045610	protein kinase (CDK9)	0.01	OrthoFinder output from all 47 species
Spa_g52648	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Tin_g05641	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Zm00001e016519_P001	Zm00001e016519	protein kinase (CDK9)	0.04	OrthoFinder output from all 47 species
Zm00001e026001_P001	Zm00001e026001	protein kinase (CDK9)	0.04	OrthoFinder output from all 47 species
Zm00001e035463_P001	IBS1, Zm00001e035463	protein kinase (CDK9)	0.01	OrthoFinder output from all 47 species
Zm00001e038208_P002	Zm00001e038208	protein kinase (CDK9)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	121	405

External Links

No external refs found!

Solyc03g115660.3.1 (IBS1, Solyc03g115660)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation