LOC_Os10g40090 (Os10g0548600)


Aliases : Os10g0548600

Description : 10.7 cell wall.modification member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B2 (EXPB2)


Gene families : OG_01_0000141 (Gene family) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g40090
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G45110 ATHEXP BETA 1.1,... expansin B4 0.02 Gene family
AT3G60570 ATHEXP BETA 1.3,... expansin B5 0.04 Gene family
LOC_Os03g01630 Os03g0106700 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.03 Gene family
LOC_Os03g01640 Os03g0106800 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.03 Gene family
LOC_Os04g46650 Os04g0552200 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.04 Gene family
LOC_Os10g40720 Os10g0555900 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.01 Gene family
LOC_Os10g40730 Os10g0556100 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.02 Gene family
MA_62463g0010 No alias 10.7 cell wall.modification putative... 0.01 Gene family
Smo171427 PACid_15408856 10.7 cell wall.modification putative... 0.02 Gene family
Solyc03g093390.3.1 Solyc03g093390.3 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.02 Gene family
Solyc10g018500.1.1 Solyc10g018500.1 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.03 Gene family
Zm00001d017495 GRMZM2G056236 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.02 Gene family
Zm00001d017734 GRMZM2G127236,... 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.13 Gene family
Zm00001d019560 GRMZM2G154178 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.04 Gene family
Zm00001d026169 GRMZM2G100931 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.04 Gene family
Zm00001d027281 GRMZM2G097229 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.02 Gene family
Zm00001d029899 GRMZM2G021621 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.04 Gene family
Zm00001d029903 GRMZM2G021427 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.02 Gene family
Zm00001d047087 GRMZM2G013002 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.03 Gene family
Zm00001d047089 GRMZM2G013671 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.03 Gene family
Zm00001d047094 GRMZM2G073260 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.03 Gene family
Zm00001d047135 GRMZM2G072886 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.15 Gene family
Zm00001d047142 GRMZM2G020852,... 10.7 cell wall.modification member of BETA-EXPANSINS.... 0.08 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 172 253
IPR009009 RlpA-like_DPBB 81 158
No external refs found!