1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g113990.3.1

Solyc03g113990.3.1 (Solyc03g113990)


Aliases : Solyc03g113990

Description : Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana (sp|q8w485|y5010_arath : 241.0)


Gene families : OG0006772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006772_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113990.3.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020904.46 No alias Uncharacterized protein At5g50100, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre03.g145587 No alias Uncharacterized protein At5g50100, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dcu_g21210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12970 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041886_P001 Zm00001e041886 Uncharacterized protein At5g50100, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007263 DCC1-like 82 192
No external refs found!