1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g113920.4.1

Solyc03g113920.4.1 (Solyc03g113920)


Aliases : Solyc03g113920

Description : Calmodulin-binding protein 60 A OS=Arabidopsis thaliana (sp|c0svv6|cb60a_arath : 458.0)


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113920.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G62570 No alias Calmodulin binding protein-like 0.01 OrthoFinder output from all 47 species
Adi_g107973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13648 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Aob_g36882 No alias regulatory protein *(CBP60) of systemic acquired... 0.01 OrthoFinder output from all 47 species
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os02g08120.1 LOC_Os02g08120 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35470.1 LOC_Os02g35470 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g36660.1 LOC_Os04g36660 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os11g44600.1 LOC_Os11g44600 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os11g44630.1 LOC_Os11g44630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g36910.1 LOC_Os12g36910 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008453 No alias regulatory protein *(CBP60) of systemic acquired... 0.01 OrthoFinder output from all 47 species
Sam_g10626 No alias regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Solyc02g079040.3.1 Solyc02g079040 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc07g006830.4.1 Solyc07g006830 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g036390.2.1 Solyc12g036390 Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g02860 No alias regulatory protein *(CBP60) of systemic acquired... 0.04 OrthoFinder output from all 47 species
Zm00001e008018_P001 Zm00001e008018 Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e014847_P002 Zm00001e014847 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR012416 CBP60 91 380
No external refs found!