Solyc03g113070.4.1 (ATH1, ATATH1, ABCA2,...)

Aliases : ATH1, ATATH1, ABCA2, Solyc03g113070

Description : fatty acid transporter (ABCA). subfamily ABCA transporter

Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g113070.4.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G61690	ATH15, ATATH15	ABC2 homolog 15	0.03	OrthoFinder output from all 47 species
AT5G61730	ATH11, ATATH11	ABC2 homolog 11	0.05	OrthoFinder output from all 47 species
Aev_g01527	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g07489	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09766	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene37699.t1	ATH1, ATATH1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016230	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: CDS=354-3422	0.04	OrthoFinder output from all 47 species
Ceric.02G040100.1	ATH1, ATATH1,...	subfamily ABCA transporter & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.66	ATH1, ATATH1, ABCA2	ABC transporter A family member 2 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g10442	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g20236	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10004022g0010	ATH15, ATATH15	ABC transporter A family member 11 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g18500.1	ATH1, ATATH1, ABCA2	fatty acid transporter (ABCA). subfamily ABCA transporter	0.04	OrthoFinder output from all 47 species
Msp_g36286	ATH15, ATATH15	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g34266	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g08580	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19384	ATH1, ATATH1, ABCA2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g06474	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06475	ATH15, ATATH15	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g08946	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08285	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g25161	No alias	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo76005	ATH1, ATATH1, ABCA2	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc06g070960.3.1	ATH1, ATATH1,...	fatty acid transporter (ABCA). subfamily ABCA transporter	0.05	OrthoFinder output from all 47 species
Spa_g22954	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12605	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004192_P001	ATH1, ATATH1,...	fatty acid transporter (ABCA). subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	549	691

External Links

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Solyc03g113070.4.1 (ATH1, ATATH1, ABCA2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation