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  5. Solyc03g113040.4.1

Solyc03g113040.4.1 (ATATH6, ATH6, Solyc03g113040)


Aliases : ATATH6, ATH6, Solyc03g113040

Description : subfamily ABCA transporter


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113040.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G47740 ATATH2, ATH2, ABCA3 ABC2 homolog 2 0.07 OrthoFinder output from all 47 species
AT3G47750 ABCA4, ATATH3 ATP binding cassette subfamily A4 0.05 OrthoFinder output from all 47 species
AT3G47770 ATH5, ATATH5, ABCA6 ABC2 homolog 5 0.05 OrthoFinder output from all 47 species
AT3G47790 ATH7, ATATH7 ABC2 homolog 7 0.04 OrthoFinder output from all 47 species
Aev_g01577 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38161 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.67 ATATH4, ABCA5, ATH4 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Cre14.g618400 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Cre17.g721000 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Dcu_g20095 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008040001 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Sam_g16539 No alias subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc06g070950.2.1 ATATH6, ATH6,... subfamily ABCA transporter 0.05 OrthoFinder output from all 47 species
Zm00001e014485_P003 ATH7, ATATH7,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 645 789
No external refs found!