Solyc03g112740.2.1 (KNAT2, ATK1, Solyc03g112740)

Aliases : KNAT2, ATK1, Solyc03g112740

Description : transcription factor (KNOX)

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g112740.2.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g31169	KNAT5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56442.t2	KNAT3, Aspi01Gene56442	KNOX-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g07800	KNAT3	KNOX-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g09080	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01019880001	KNAT7, IXR11	RNA biosynthesis.transcriptional activation.HB...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005540	KNOX1	61	102
IPR005541	KNOX2	117	163

External Links

No external refs found!