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  5. Solyc03g098470.3.1

Solyc03g098470.3.1 (Solyc03g098470)


Aliases : Solyc03g098470

Description : component Sm-E of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG0007427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g098470.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g022466 No alias component *(Sm-E) of U1/U2/U4/U5-associated Sm accessory... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.151 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder output from all 47 species
Cre08.g385200 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder output from all 47 species
LOC_Os02g03440.1 LOC_Os02g03440 component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.06 OrthoFinder output from all 47 species
Zm00001e039734_P001 Zm00001e039734 component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 20 83
No external refs found!