LOC_Os10g39700 (Os10g0543400)


Aliases : Os10g0543400

Description : 20.1 stress.biotic encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB)


Gene families : OG_01_0000294 (Gene family) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g39700
Cluster HCCA cluster: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT2G43570 CHI chitinase, putative 0.03 Gene family
AT2G43620 No alias Chitinase family protein 0.02 Gene family
GSVIVT01038111001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
GSVIVT01038120001 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
LOC_Os02g39330 Os02g0605900 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
LOC_Os04g41620 Os04g0493400 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
LOC_Os04g41680 Os04g0494100 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
LOC_Os05g33150 Os05g0399700 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
MA_102538g0010 No alias 20.1 stress.biotic Chitinase family protein 0.01 Gene family
MA_10430424g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
MA_10431378g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
MA_10431378g0020 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.03 Gene family
MA_170598g0010 No alias 20.1 stress.biotic Chitinase family protein 0.03 Gene family
MA_191308g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
MA_295712g0010 No alias 20.1 stress.biotic encodes an EP3 chitinase that is... 0.04 Gene family
Solyc04g072000.3.1 Solyc04g072000.3 20.1 stress.biotic encodes an EP3 chitinase that is... 0.02 Gene family
Zm00001d017152 GRMZM2G129189 20.1 stress.biotic encodes an EP3 chitinase that is... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan
BP GO:0006032 chitin catabolic process IEA InterProScan
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 38 161
No external refs found!