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  5. Solyc03g097730.2.1

Solyc03g097730.2.1 (Solyc03g097730)


Aliases : Solyc03g097730

Description : CASP-like protein 1F1 OS=Ricinus communis (sp|b9ra90|cspl8_ricco : 130.0)


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g097730.2.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.03 OrthoFinder output from all 47 species
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
Gb_12158 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26811 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Gb_40899 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.03 OrthoFinder output from all 47 species
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.02 OrthoFinder output from all 47 species
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Solyc02g088160.4.1 Solyc02g088160 Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc03g097720.4.1 Solyc03g097720 CASP-like protein 1F1 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc04g005620.3.1 Solyc04g005620 Casparian strip membrane protein 2 OS=Solanum demissum... 0.04 OrthoFinder output from all 47 species
Solyc06g074230.3.1 Solyc06g074230 Casparian strip membrane protein 2 OS=Triphysaria... 0.04 OrthoFinder output from all 47 species
Solyc09g010200.4.1 Solyc09g010200 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Solyc10g083250.2.1 Solyc10g083250 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e015806_P001 Zm00001e015806 Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species
Zm00001e017631_P001 Zm00001e017631 CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) 0.03 OrthoFinder output from all 47 species
Zm00001e024279_P001 Zm00001e024279 Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 21 163
No external refs found!