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  5. Solyc03g097720.4.1

Solyc03g097720.4.1 (Solyc03g097720)


Aliases : Solyc03g097720

Description : CASP-like protein 1F1 OS=Vitis vinifera (sp|a7phn8|cspl4_vitvi : 133.0)


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g097720.4.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00177260 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.04 OrthoFinder output from all 47 species
AT1G14160 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
AT4G15610 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.1 OrthoFinder output from all 47 species
GSVIVT01010992001 No alias CASP-like protein 1E1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01033894001 No alias Casparian strip membrane protein 1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.06 OrthoFinder output from all 47 species
Gb_11697 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Gb_12158 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12159 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Gb_26814 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Gb_40899 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g36845.1 LOC_Os02g36845 Casparian strip membrane protein 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os04g38690.1 LOC_Os04g38690 Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58760.1 LOC_Os04g58760 Casparian strip membrane protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os06g12500.1 LOC_Os06g12500 Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os12g41690.1 LOC_Os12g41690 CASP-like protein 1B1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10431939g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.03 OrthoFinder output from all 47 species
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
MA_64798g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.03 OrthoFinder output from all 47 species
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
MA_90653g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.04 OrthoFinder output from all 47 species
MA_94788g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Pir_g03800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g067330.3.1 Solyc01g067330 CASP-like protein 1E1 OS=Glycine max... 0.05 OrthoFinder output from all 47 species
Solyc02g069730.3.1 Solyc02g069730 CASP-like protein 1B1 OS=Ricinus communis... 0.04 OrthoFinder output from all 47 species
Solyc02g088160.4.1 Solyc02g088160 Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc03g097730.2.1 Solyc03g097730 CASP-like protein 1F1 OS=Ricinus communis... 0.03 OrthoFinder output from all 47 species
Solyc04g005620.3.1 Solyc04g005620 Casparian strip membrane protein 2 OS=Solanum demissum... 0.06 OrthoFinder output from all 47 species
Solyc05g007790.3.1 Solyc05g007790 Casparian strip membrane protein 2 OS=Solanum demissum... 0.01 OrthoFinder output from all 47 species
Solyc06g072550.3.1 Solyc06g072550 CASP-like protein 1F1 OS=Vitis vinifera... 0.01 OrthoFinder output from all 47 species
Solyc06g074230.3.1 Solyc06g074230 Casparian strip membrane protein 2 OS=Triphysaria... 0.05 OrthoFinder output from all 47 species
Solyc09g010200.4.1 Solyc09g010200 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Solyc10g083250.2.1 Solyc10g083250 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Zm00001e003216_P001 Zm00001e003216 CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.04 OrthoFinder output from all 47 species
Zm00001e006491_P001 Zm00001e006491 Casparian strip membrane protein 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e015806_P001 Zm00001e015806 Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.02 OrthoFinder output from all 47 species
Zm00001e017631_P001 Zm00001e017631 CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) 0.03 OrthoFinder output from all 47 species
Zm00001e021080_P001 Zm00001e021080 CASP-like protein 1U4 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species
Zm00001e024279_P001 Zm00001e024279 Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.02 OrthoFinder output from all 47 species
Zm00001e026902_P001 Zm00001e026902 CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.04 OrthoFinder output from all 47 species
Zm00001e033338_P001 Zm00001e033338 CASP-like protein 1D1 OS=Zea mays (sp|b6u361|cspl3_maize : 205.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 22 164
No external refs found!