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  5. Solyc03g097330.1.1

Solyc03g097330.1.1 (Solyc03g097330)


Aliases : Solyc03g097330

Description : no hits & (original description: none)


Gene families : OG0000565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g097330.1.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Aev_g05413 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g02431 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g25949 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene14856.t1 Aspi01Gene14856 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008355 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008766 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g10475 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02666 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05906 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03177 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g33094 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g06448 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29707 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g48906 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g08136 ATSIG1, SIGB,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g20888 SIGB, SIG2,... basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!