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  5. Solyc03g096870.3.1

Solyc03g096870.3.1 (CDC20.1, Solyc03g096870)


Aliases : CDC20.1, Solyc03g096870

Description : CDC20-type (APC/C)-dependent ubiquitination activator protein


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g096870.3.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT4G33260 CDC20.2 Transducin family protein / WD-40 repeat family protein 0.06 OrthoFinder output from all 47 species
AT4G33270 CDC20.1 Transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
Adi_g065642 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Ceric.26G067600.1 CDC20.2, Ceric.26G067600 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51110.1 CDC20.1, LOC_Os04g51110 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.09 OrthoFinder output from all 47 species
Mp3g00030.1 CDC20.2 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.04 OrthoFinder output from all 47 species
Ppi_g11513 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.02 OrthoFinder output from all 47 species
Solyc03g095210.2.1 CDC20.2, Solyc03g095210 Cell division cycle 20.2, cofactor of APC complex... 0.03 OrthoFinder output from all 47 species
Tin_g20269 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 173 231
IPR001680 WD40_repeat 256 290
IPR001680 WD40_repeat 391 426
IPR001680 WD40_repeat 303 341
No external refs found!