Aliases : Os10g0540100
Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): LOC_Os10g39460 | |
Cluster | HCCA cluster: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G14330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Gene family | |
GSVIVT01031251001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
LOC_Os01g10800 | Os01g0205200 | No description available | 0.02 | Gene family | |
Smo113567 | PACid_15417087 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo74842 | PACid_15412946 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.04 | Gene family | |
Solyc03g063380.2.1 | Solyc03g063380.2 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
Solyc04g051490.3.1 | Solyc04g051490.3 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.05 | Gene family | |
Zm00001d028587 | GRMZM5G836424 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Zm00001d043068 | GRMZM2G399433 | No description available | 0.02 | Gene family | |
Zm00001d048451 | GRMZM2G171994 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 274 | 310 |
IPR002885 | Pentatricopeptide_repeat | 374 | 421 |
IPR002885 | Pentatricopeptide_repeat | 245 | 273 |
IPR002885 | Pentatricopeptide_repeat | 145 | 172 |
IPR002885 | Pentatricopeptide_repeat | 76 | 98 |
IPR002885 | Pentatricopeptide_repeat | 449 | 474 |
IPR002885 | Pentatricopeptide_repeat | 175 | 205 |
IPR032867 | DYW_dom | 547 | 671 |
No external refs found! |