1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g095820.4.1

Solyc03g095820.4.1 (MCA1, Solyc03g095820)


Aliases : MCA1, Solyc03g095820

Description : mechanosensitive cation channel (MCA)


Gene families : OG0002415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002415_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g095820.4.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00084120 MCA1,... Solute transport.channels.MCA mechanosensitive cation channel 0.03 OrthoFinder output from all 47 species
Ala_g01696 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Aob_g29407 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Aop_g05446 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Cba_g13527 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Cba_g31700 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.03G065900.1 MCA1, Ceric.03G065900 mechanosensitive cation channel *(MCA) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02563 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
Gb_10308 MCA2 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_16864 MCA1 mechanosensitive cation channel (MCA) 0.03 OrthoFinder output from all 47 species
LOC_Os03g06120.3 MCA1, LOC_Os03g06120 mechanosensitive cation channel (MCA) 0.02 OrthoFinder output from all 47 species
Len_g16735 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g37541 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species
MA_10433546g0010 MCA2 Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_1425g0010 MCA1 Cell number regulator 13 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
MA_6161g0010 MCA1 Cell number regulator 13 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Nbi_g12337 MCA1 mechanosensitive cation channel *(MCA) & original... 0.02 OrthoFinder output from all 47 species
Sam_g22464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06407 MCA1 mechanosensitive cation channel *(MCA) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 269 366
No external refs found!