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Aliases : ATH9, TH9, TRX H9, Solyc03g095500
Description : H-type thioredoxin
Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc03g095500.3.1 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00259770 | TRXH2, TRX2,... | Redox homeostasis.cytosol/mitochondrion/nucleus redox... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007600 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080491 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18367 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g45755 | ATHM4, TRX-M4, ATM4 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g13818 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24148 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16763.t1 | ATTRX1, ATTRX... | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g44106 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g40190.1 | ATH9, TH9, TRX... | H-type thioredoxin | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g20804 | No alias | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g36286 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
| MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 31 | 128 |
| No external refs found! |