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  5. Solyc03g095180.3.1

Solyc03g095180.3.1 (FSD2, Solyc03g095180)


Aliases : FSD2, Solyc03g095180

Description : iron superoxide dismutase. PAP9/FSD2 cofactor of plastid-encoded RNA polymerase


Gene families : OG0002805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc03g095180.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00032580 FSD3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AT5G23310 FSD3 Fe superoxide dismutase 3 0.16 OrthoFinder output from all 47 species
AT5G51100 FSD2 Fe superoxide dismutase 2 0.13 OrthoFinder output from all 47 species
Als_g08210 ATFSD1, FSD1 cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.02 OrthoFinder output from all 47 species
Aob_g00902 ATFSD1, FSD1 cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.02 OrthoFinder output from all 47 species
Aop_g16309 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013850001 FSD2 RNA biosynthesis.organelle machineries.RNA polymerase... 0.08 OrthoFinder output from all 47 species
GSVIVT01026137001 FSD3 RNA biosynthesis.organelle machineries.RNA polymerase... 0.07 OrthoFinder output from all 47 species
Gb_28365 FSD3 iron superoxide dismutase. PAP4/FSD3 cofactor of... 0.06 OrthoFinder output from all 47 species
Len_g01062 ATFSD1, FSD1 cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.02 OrthoFinder output from all 47 species
Mp7g14090.1 ATFSD1, FSD1 iron superoxide dismutase 0.07 OrthoFinder output from all 47 species
Pnu_g06157 ATFSD1, FSD1 cofactor of plastid-encoded RNA polymerase *(PAP4/FSD3)... 0.02 OrthoFinder output from all 47 species
Smo91586 ATFSD1, FSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.04 OrthoFinder output from all 47 species
Zm00001e029984_P001 FSD3, Zm00001e029984 iron superoxide dismutase. PAP4/FSD3 cofactor of... 0.03 OrthoFinder output from all 47 species
Zm00001e036663_P001 FSD2, Zm00001e036663 iron superoxide dismutase 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 48 133
IPR019832 Mn/Fe_SOD_C 140 258
No external refs found!