Solyc03g093650.3.1 (Solyc03g093650)


Aliases : Solyc03g093650

Description : subfamily ABCB transporter


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g093650.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00018p00193820 PGP1, ABCB1,... ABC transporter B family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.08 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AMTR_s00048p00046670 PGP2,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00055p00102180 ABCB14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00132920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT1G02530 PGP12 P-glycoprotein 12 0.03 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.04 OrthoFinder output from all 47 species
AT3G28345 No alias ABC transporter family protein 0.08 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.04 OrthoFinder output from all 47 species
AT4G01830 PGP5 P-glycoprotein 5 0.05 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.05 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g012284 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025752 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g029160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056650 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056680 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067518 PGP1, ABCB1, ATPGP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087061 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105656 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39147 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17861 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27372 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29011 PGP10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07510 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14092 PGP21 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28385 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28419 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12898 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16050 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29915 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene15960.t1 Aspi01Gene15960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32172.t1 PGP2, Aspi01Gene32172 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46501.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62054.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.03 OrthoFinder output from all 47 species
Azfi_s0230.g059155 No alias not classified & original description: CDS=1-966 0.02 OrthoFinder output from all 47 species
Cba_g38324 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59935 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G049900.1 PGP11, Ceric.14G049900 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G058800.1 PGP2, Ceric.38G058800 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35627 PGP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35993 PGP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40237 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45466 PGP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30302 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30303 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13730 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28462 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006613001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01017696001 PGP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01021365001 PGP9 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_02468 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_06993 No alias serine carboxypeptidase. subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_07563 ABCB19,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_10215 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_10216 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_32125 PGP11 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_33057 ABCB19,... subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species
Gb_33058 ABCB19,... subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g35030.1 PGP11, LOC_Os01g35030 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g50160.1 PGP11, LOC_Os01g50160 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
LOC_Os01g52550.1 LOC_Os01g52550 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g74630.1 PGP11, LOC_Os01g74630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Len_g54677 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56555 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16090 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19020 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19646 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21852 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40621 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_102299g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_141308g0010 ABCB19,... ABC transporter B family member 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3448627g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_83806g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_9148200g0010 No alias ABC transporter B family member 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_93218g0010 PGP11 ABC transporter B family member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9415070g0020 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Mp7g04390.1 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Msp_g13353 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14678 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17749 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19766 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26680 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32270 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34237 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36979 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44397 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29224 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29607 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30543 PGP18 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g38163 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50526 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60074 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65660 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12991 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16181 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25857 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30303 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Pp3c6_7260V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07008 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919 ABCB19,... subfamily ABCB transporter & original description: CDS=118-4143 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017899 PGP11 subfamily ABCB transporter & original description: CDS=362-4450 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.05 OrthoFinder output from all 47 species
Sam_g34538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52431 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo229984 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo231714 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo233433 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo408755 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc03g122070.3.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc07g064120.2.1 Solyc07g064120 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40340 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08424 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11244 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38654 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38947 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41085 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014797_P002 Zm00001e014797 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Zm00001e019933_P001 Zm00001e019933 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e025438_P001 PGP21, Zm00001e025438 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e028117_P001 PGP11, Zm00001e028117 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e041087_P002 Zm00001e041087 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 376 525
IPR011527 ABC1_TM_dom 664 934
IPR011527 ABC1_TM_dom 48 296
IPR003439 ABC_transporter-like_ATP-bd 1006 1155
No external refs found!