Solyc03g093230.4.1 (TIP5;1, Solyc03g093230)

Aliases : TIP5;1, Solyc03g093230

Description : tonoplast intrinsic protein (TIP)

Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g093230.4.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G47440	TIP5;1	tonoplast intrinsic protein 5;1	0.03	OrthoFinder output from all 47 species
Adi_g086682	PIP1;5, PIP1D	plasma membrane intrinsic protein *(PIP) & original...	0.02	OrthoFinder output from all 47 species
Aev_g10051	GAMMA-TIP,...	tonoplast intrinsic protein *(TIP) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04423	PIP2;1, PIP2, PIP2A	plasma membrane intrinsic protein *(PIP) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g05581	GAMMA-TIP,...	tonoplast intrinsic protein *(TIP) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os07g26690.1	PIP2;1, PIP2,...	plasma membrane intrinsic protein (PIP)	0.03	OrthoFinder output from all 47 species
Msp_g37622	PIP2;1, PIP2, PIP2A	plasma membrane intrinsic protein *(PIP) & original...	0.01	OrthoFinder output from all 47 species
Zm00001e007564_P001	PIP2B, PIP2;2,...	plasma membrane intrinsic protein (PIP)	0.02	OrthoFinder output from all 47 species
Zm00001e023039_P001	PIP2B, PIP2;2,...	plasma membrane intrinsic protein (PIP)	0.03	OrthoFinder output from all 47 species
Zm00001e041530_P001	TIP5;1, Zm00001e041530	tonoplast intrinsic protein (TIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015267	channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000425	MIP	13	228

External Links

No external refs found!