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  5. Solyc03g082870.4.1

Solyc03g082870.4.1 (Solyc03g082870)


Aliases : Solyc03g082870

Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana (sp|q9m2z2|wdr5a_arath : 85.1)


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g082870.4.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268480 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.04 OrthoFinder output from all 47 species
Adi_g057706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59230.t2 Aspi01Gene59230 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G113100.1 Ceric.01G113100 not classified & original description: pacid=50591929... 0.04 OrthoFinder output from all 47 species
Dcu_g45060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034183001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02440.1 LOC_Os03g02440 COMPASS-like H3K4 histone methylase component WDR5A... 0.03 OrthoFinder output from all 47 species
Ppi_g54834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo427312 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 563 586
IPR001680 WD40_repeat 416 451
IPR001680 WD40_repeat 374 409
IPR001680 WD40_repeat 275 305
No external refs found!