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  5. Solyc03g082620.4.1

Solyc03g082620.4.1 (ATYSL3, YSL3, Solyc03g082620)


Aliases : ATYSL3, YSL3, Solyc03g082620

Description : iron chelator transporter (YSL). ferric cation-chelator transporter (YSL)


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g082620.4.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene03882.t1 YSL6, Aspi01Gene03882 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019645001 ATYSL1, YSL1 Nutrient uptake.iron uptake.chelation-based strategy... 0.06 OrthoFinder output from all 47 species
GSVIVT01029329001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.07 OrthoFinder output from all 47 species
GSVIVT01029349001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
GSVIVT01038611001 ATYSL3, YSL3 Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
LOC_Os01g61390.1 YSL8, LOC_Os01g61390 iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species
LOC_Os04g44300.1 YSL7, LOC_Os04g44300 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os05g16280.1 YSL7, LOC_Os05g16280 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
MA_10432971g0020 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species
MA_934913g0010 YSL8 Probable metal-nicotianamine transporter YSL11 OS=Oryza... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 35 648
No external refs found!